Hieranoid: hierarchical orthology inference
Hieranoid 2
Paper:
"Improved orthology inference with Hieranoid 2"
Kaduk M, Sonnhammer ELL
(2016)
Hieranoid 1 (deprecated)
Paper:
"Hieranoid: hierarchical orthology inference"
Fabian Schreiber, Erik LL Sonnhammer
J. Mol. Biol. 425:2072-81 (2013)